Before you install, see the System Prerequisites guide to make sure you have all required system packages installed.
Creating a virtual environment¶
While not strictly required, it is recommended to install Girder within
its own virtual environment
to isolate its dependencies from other python packages. To generate a new
virtual environment, first install/update the
sudo pip install -U virtualenv pip
Now create a virtual environment using the
You can place the virtual environment directory wherever you want, but it should
not be moved. The following command will generate a new directory called
girder_env in your home directory:
Enter the virtual environment:
(girder_env) prepended to your prompt indicates you have entered
the virtual environment. Inside the virtual environment you can use
python, and any other python script installed in your path as usual.
You can exit the virtual environment by running the shell function
deactivate. The shell variable
VIRTUAL_ENV will also list the
absolute path to the current virtual environment. Entering a virtual
environment only persists for your current shell, so you must source
the activation script again whenever you wish to enter within a
new shell session. Users and developers needing to work on several virtual
environments should consider using other packages that help manage them such as
Girder can be installed either from the Python Package Index (pypi) or via a Git repository. Installing from pypi gives you the latest distributed version. Installing from git would be more suitable for development or to have a specific commit, or to use the latest Girder features before they are released in official packages.
Install from pypi¶
To install the Girder distribution from the python package index, simply run
pip install girder
This will install the core Girder server as a site package in your system or virtual environment. At this point, you might want to check the configuration to change your plugin and logging paths. In order to use the web interface, you must also install the web client libraries. Girder installs a python script that will automatically build and install these libraries for you. Just run the following command:
Installing the web client code requires the node package manager (npm). See the System Prerequisites section for instructions on installing nodejs.
If you installed Girder into your system
site-packages, you may
need to run the above commands as root.
Once this is done, you are ready to start using Girder as described in this section: Run.
Installing extra dependencies with pip¶
Girder comes bundled with a number of Plugins that require extra python dependencies in order to use. By default, none of these dependencies will be installed; however, you can tell pip to install them using pip’s “extras ” syntax. Each girder plugin requiring extra python dependencies can be specified during the pip install. For example, installing girder with support for the celery_jobs and geospatial plugins can be done like this:
pip install girder[celery_jobs,geospatial]
There is also an extra you can use to install the depencies for all bundled
plugins supported in the current python environment called
pip install girder[plugins]
Not all plugins are available in every python version and platform. Specifying a plugin for in an unsupported environment will raise an error.
Install from Git repository¶
Obtain the Girder source code by cloning the Git repository on GitHub:
git clone https://github.com/girder/girder.git cd girder
To run the server, you must install some external Python package dependencies:
pip install -e .
pip install -e .[plugins]
to install the plugins as well.
This will install the most recent versions of all dependencies.
You can also try to run
pip install -r requirements.txt to duplicate
the exact versions used by our CI testing environment; however, this
can lead to problems if you are installing other libraries in the same
virtual or system environment.
To build the client-side code project, cd into the root of the repository and run:
To run the server, first make sure the Mongo daemon is running. To manually start it, run:
Then to run Girder itself, just use the following command:
Then open http://localhost:8080/ in your web browser, and you should see the application.
The first user to be created in the system is automatically given admin permission
over the instance, so the first thing you should do after starting your instance for
the first time is to register a user. After that succeeds, you should see a link
appear in the navigation bar that says
The next recommended action is to enable any plugins you want to run on your server.
Admin console navigation link, then click
Plugins. Here, you
can turn plugins on or off. Whenever you change the set of plugins that are
enabled, you need to press the Rebuild and restart button at the top of the
Plugins page to rebuild the web client and restart the server to apply the change.
For information about specific plugins, see the Plugins section.
After you have enabled any desired plugins and restarted the server, the next
recommended action is to create an
Assetstore for your system. No users
can upload data to the system until an assetstore is created, since all files
in Girder must reside within an assetstore. See the Assetstores section
for a brief overview of
Installing third-party plugins¶
Girder ships with a standard library of plugins that can be enabled in the admin console, but it’s common for Girder installations to require additional third-party plugins to be installed. If you’re using a pip installed version of Girder, you can simply use the following command:
girder-install plugin /path/to/your/plugin
That command will expose the plugin to Girder and build any web client targets associated with the plugin. You will still need to enable it in the console and then restart the Girder server before it will be active.
girder-install plugin command can also accept a list of plugins
to be installed. You may need to run it as root if you installed Girder at the
For development purposes it is possible to symlink (rather than copy) the plugin
directory. This is accomplished with the
girder-install plugin -s /path/to/your/plugin
Enabled plugins installed with
-s may be edited in place and those changes will
be reflected after a server restart.